Subset GDS with gene(s)

Subset a server side GDS with the SNPs from selected gene(s)

ds.getSNPSbyGen(gdsFile, genes, name = NULL, datasources = NULL)

Arguments

gdsFile

character Name of the GDS on the server

genes

character vector Name of the gene(s) to select (HGCN nomenclature)

name

character (default NULL) Name of the subsetted GDS, if NULL the name gds_subsetted will be used.

datasources

a list of DSConnection-class objects obtained after login.

Value

This function does not have an output. It creates (or overwrites) a GDS object on the study server.