Add an outcome extraction (convenience wrapper)

Convenience function that wraps ds.omop.plan.events with representation = list(format = "features") to produce a person-level binary outcome indicator for the given concept set. This is a shorthand for defining an event-level features output focused on outcome identification.

Usage

ds.omop.plan.outcome(plan, name, concept_set, table = "condition_occurrence")

Arguments

plan

An omop_plan object.

name

Character; output name used as a key in the plan's outputs list.

concept_set

Numeric vector; concept IDs that define the outcome event.

table

Character; source OMOP table containing the outcome events.

Value

The modified omop_plan with the outcome output appended.

See also

ds.omop.plan.events, ds.omop.plan.survival

Examples

if (FALSE) { # \dontrun{
plan <- ds.omop.plan()
plan <- ds.omop.plan.outcome(plan,
  name = "diabetes_outcome",
  concept_set = c(201826),
  table = "condition_occurrence"
)
} # }